TF_ChIP-seq_ENCSR531VIJ
TF_ChIP-seq ENCSR531VIJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MIER3" and target="MIER3"]
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| Id: | TF_ChIP-seq/ENCSR531VIJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR531VIJ [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MIER3" and target="MIER3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MIER3 output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF186JAO|/files/ENCFF186JAO/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN940LZA|/analyses/ENCAN940LZA/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF261LSG|/files/ENCFF261LSG/}, {ENCFF186JAO|/files/ENCFF186JAO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.32 and a self consistency ratio of 4.48. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF263GGJ|/files/ENCFF263GGJ/}, {ENCFF764OWU|/files/ENCFF764OWU/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.32 and a self consistency ratio of 4.48. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR531VIJ | float |
TF_ChIP-seq_ENCSR531VIJ |
TF_ChIP-seq ENCSR531VIJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MIER3" and target="MIER3"]
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[7.68, 336] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF186JAO.bed.gz | 393.01 KB | 0371dbbe63d2165e722529096473a935 |
| ENCFF186JAO.bed.gz.dvc | 100.0 B | f6ccc740081e20ae415fa9fc316df71a |
| ENCFF186JAO.tabix.bed.gz | 291.77 KB | 494662f5684898ed91f38414f18b56cd |
| ENCFF186JAO.tabix.bed.gz.dvc | 106.0 B | de53b31a704348612b19687a7ec51e9c |
| ENCFF186JAO.tabix.bed.gz.tbi | 129.46 KB | e01f04dc9fff52a563a2da5c0cb3ca66 |
| ENCFF186JAO.tabix.bed.gz.tbi.dvc | 110.0 B | 410b426fcce57a420ef65c0efc77bf78 |
| genomic_resource.yaml | 2.99 KB | 6fe1c5f0cffdca87ead56ef006c9a263 |
| genomic_resource_original.yaml | 2.82 KB | 4ed4d690abb396c3ae16fe9071405973 |
| statistics/ |