| Id: | TF_ChIP-seq/ENCSR513YMV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR513YMV [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ELK4" and target="ELK4"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ELK4 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN563FFL|/analyses/ENCAN563FFL/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF890ZHY|/files/ENCFF890ZHY/} processed by ChIP-seq ENCODE4 v1.9.0 GRCh38 pipeline have a rescue ratio of 1.98 and a self consistency ratio of 4.48. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR513YMV | float |
TF_ChIP-seq_ENCSR513YMV |
TF_ChIP-seq ENCSR513YMV [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ELK4" and target="ELK4"]
|
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[7.48, 230] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF890ZHY.bed.gz | 47.21 KB | 66ad66e0ecc93108f8275ba1fb437304 |
| ENCFF890ZHY.bed.gz.dvc | 99.0 B | c6bff8b49e1897e0dee7e13d8c478485 |
| ENCFF890ZHY.tabix.bed.gz | 31.72 KB | 1ee3dcfaf12aecdbe7c49561baf3bfea |
| ENCFF890ZHY.tabix.bed.gz.dvc | 105.0 B | 61e2a94137c8d33bd57e5cf530e9d157 |
| ENCFF890ZHY.tabix.bed.gz.tbi | 26.35 KB | 862db4caa8ed62aa97a04435614a4931 |
| ENCFF890ZHY.tabix.bed.gz.tbi.dvc | 109.0 B | 6544c6012de4832be274c9934724321f |
| genomic_resource.yaml | 2.21 KB | 4278eda3a17ffc8c4d60ebf726013646 |
| genomic_resource_original.yaml | 2.05 KB | 4c7cf6de6a3acdb032cf66080168dc50 |
| statistics/ |