| Id: | TF_ChIP-seq/ENCSR512JVC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR512JVC [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF724" and target="ZNF724P"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZNF724 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN481PAS|/analyses/ENCAN481PAS/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF991QJO|/files/ENCFF991QJO/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline have a rescue ratio of 1.28 and a self consistency ratio of 2.95. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR512JVC | float |
TF_ChIP-seq_ENCSR512JVC |
TF_ChIP-seq ENCSR512JVC [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF724" and target="ZNF724P"]
|
![]() |
[10.4, 393] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF991QJO.bed.gz | 229.08 KB | e7c92478d6193ae9d1fecdf7656740ab |
| ENCFF991QJO.bed.gz.dvc | 100.0 B | 62b2b0c243a37ce3ab88921f3ef1ad8a |
| ENCFF991QJO.tabix.bed.gz | 170.64 KB | aee67a980bc1fcba57149b3a98fccac9 |
| ENCFF991QJO.tabix.bed.gz.dvc | 106.0 B | eed6889e2c84ea6289d88d84f5cdb646 |
| ENCFF991QJO.tabix.bed.gz.tbi | 80.05 KB | 87e292ff8950b88a94915da8961eb654 |
| ENCFF991QJO.tabix.bed.gz.tbi.dvc | 109.0 B | e4402b9594d8911f30509764d6087fa4 |
| genomic_resource.yaml | 2.23 KB | be5b2f9482dec0f3f5ff1431ac080a39 |
| genomic_resource_original.yaml | 2.06 KB | 5a976d80e17fcb62b705056544d1e6e5 |
| statistics/ |