TF_ChIP-seq_ENCSR506HXN
TF_ChIP-seq ENCSR506HXN [biosample_summary="Homo sapiens HepG2" and target="TRIM22"]
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| Id: | TF_ChIP-seq/ENCSR506HXN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR506HXN [biosamplesummary="Homo sapiens HepG2" and target="TRIM22"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN614JOJ|/analyses/ENCAN614JOJ/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF985NVN|/files/ENCFF985NVN/}, {ENCFF623ALA|/files/ENCFF623ALA/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.27 and a self consistency ratio of 1.15. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF696FPE|/files/ENCFF696FPE/}, {ENCFF418JPC|/files/ENCFF418JPC/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.27 and a self consistency ratio of 1.15. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR506HXN | float |
TF_ChIP-seq_ENCSR506HXN |
TF_ChIP-seq ENCSR506HXN [biosample_summary="Homo sapiens HepG2" and target="TRIM22"]
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[13.1, 137] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF623ALA.bed.gz | 42.0 KB | 4e81358d720dfe33459f0f2bd5d414c3 |
| ENCFF623ALA.bed.gz.dvc | 99.0 B | fa9349ca88e4d6f41182591c579730ce |
| ENCFF623ALA.tabix.bed.gz | 27.21 KB | c53dae3a12591c0f876e88ff953053f1 |
| ENCFF623ALA.tabix.bed.gz.dvc | 105.0 B | f5f20d8c3f83b8f225845688050101b3 |
| ENCFF623ALA.tabix.bed.gz.tbi | 23.99 KB | 1b8aa1f868ca1fc16589dd6c869edbe1 |
| ENCFF623ALA.tabix.bed.gz.tbi.dvc | 109.0 B | c3c04c129da3c403af1d1e9d098325f9 |
| genomic_resource.yaml | 2.48 KB | 4d23ae86f46411cdb828cb430e3edcbb |
| genomic_resource_original.yaml | 2.38 KB | 4c5c95d684522f0e9a3fb74762d229a5 |
| statistics/ |