TF_ChIP-seq_ENCSR505LJT
TF_ChIP-seq ENCSR505LJT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZFP37" and target="ZFP37"]
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| Id: | TF_ChIP-seq/ENCSR505LJT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR505LJT [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZFP37" and target="ZFP37"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZFP37 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN547BIP|/analyses/ENCAN547BIP/} has in progress subobject document {195eccef-32d7-49c9-8758-efb28542c80a|/documents/195eccef-32d7-49c9-8758-efb28542c80a/} audit_internal_action: Released analysis {ENCAN547BIP|/analyses/ENCAN547BIP/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF743AUT|/files/ENCFF743AUT/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.06 and a self consistency ratio of 2.23. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF721ZAA|/files/ENCFF721ZAA/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.06 and a self consistency ratio of 2.23. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR505LJT | float |
TF_ChIP-seq_ENCSR505LJT |
TF_ChIP-seq ENCSR505LJT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZFP37" and target="ZFP37"]
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[7.55, 685] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF743AUT.bed.gz | 174.83 KB | 681ac27134ba9755a2286f07ca2f85a6 |
| ENCFF743AUT.bed.gz.dvc | 100.0 B | ac929f79054d4722877f4911f18de1fb |
| ENCFF743AUT.tabix.bed.gz | 127.53 KB | c10b432455d55bd9d168b9f102fdea31 |
| ENCFF743AUT.tabix.bed.gz.dvc | 106.0 B | 444e3a4b0dd7ad6550844b30aa68b97a |
| ENCFF743AUT.tabix.bed.gz.tbi | 68.68 KB | 179e586fb2850f1ecf730054b88465e6 |
| ENCFF743AUT.tabix.bed.gz.tbi.dvc | 109.0 B | 7c6c1107a74a5e17d26239f6e29f0401 |
| genomic_resource.yaml | 2.95 KB | fb15b40c8d06df8eb312284725bc68de |
| genomic_resource_original.yaml | 2.79 KB | 0ebb0d0576b229e07dd6891cde520ba2 |
| statistics/ |