type: position_score
table:
  filename: ENCFF206PHI.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR504VDV
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR504VDV [TISSUE: Homo sapiens HEK293 genetically modified
    (insertion) using site-specific recombination targeting H. sapiens ZNF654, TARGET:
    ZNF654]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: genetically modified (insertion) using site-specific recombination
    targeting H. sapiens ZNF654


    **output\_type**: IDR thresholded peaks


    **audit\_internal\_action**: Released analysis {ENCAN172HJA|/analyses/ENCAN172HJA/}
    has in progress subobject document {971acf98-9e8b-4a2f-a08d-59cbfb49c86e|/documents/971acf98-9e8b-4a2f-a08d-59cbfb49c86e/}


    **audit\_internal\_action**: Released analysis {ENCAN172HJA|/analyses/ENCAN172HJA/}
    has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}


    **audit\_warning**: Processed alignments file {ENCFF577AJC|/files/ENCFF577AJC/}
    processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 19370320 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    ZNF654-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )


    **audit\_warning**: Processed alignments file {ENCFF168FUC|/files/ENCFF168FUC/}
    processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 17277917 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    ZNF654-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR504VDV
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: genetically modified (insertion) using site-specific
      recombination targeting H. sapiens ZNF654
    biosample_summary: Homo sapiens HEK293 genetically modified (insertion) using
      site-specific recombination targeting H. sapiens ZNF654
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0001182/
    perturbed: false
    doi: 10.17989/ENCSR504VDV
    date_created: '2016-03-29T17:50:07.947582+00:00'
    date_released: '2016-10-07'
    submitter_comment: ''
    target: ZNF654
