| Id: | TF_ChIP-seq/ENCSR498JCG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR498JCG [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ELF4" and target="ELF4"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ELF4 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN703RXA|/analyses/ENCAN703RXA/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF518EGY|/files/ENCFF518EGY/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline have a rescue ratio of 1.43 and a self consistency ratio of 2.59. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR498JCG | float |
TF_ChIP-seq_ENCSR498JCG |
TF_ChIP-seq ENCSR498JCG [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ELF4" and target="ELF4"]
|
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[7.61, 383] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF518EGY.bed.gz | 176.08 KB | e41f615a93c73ee55c54e5ef60220a8f |
| ENCFF518EGY.bed.gz.dvc | 100.0 B | 8d44f7138609d780a0b99a61d1515b1b |
| ENCFF518EGY.tabix.bed.gz | 125.25 KB | 73d874fb3e92bb5e5797e62b7f507ece |
| ENCFF518EGY.tabix.bed.gz.dvc | 106.0 B | 9dbccc99946f83d019a8f7029f61ab19 |
| ENCFF518EGY.tabix.bed.gz.tbi | 76.31 KB | 4d53495d1041dbf76e4031d734bc2ce0 |
| ENCFF518EGY.tabix.bed.gz.tbi.dvc | 109.0 B | 8f1d443b09f2d5196511e394cbb61bb3 |
| genomic_resource.yaml | 2.21 KB | b83854d1ce193aeb999ea91bf85dbb0c |
| genomic_resource_original.yaml | 2.05 KB | c20399721fdf80db26a25e02e3d38158 |
| statistics/ |