TF_ChIP-seq_ENCSR430JGJ
TF_ChIP-seq ENCSR430JGJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens THRB" and target="THRB"]
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| Id: | TF_ChIP-seq/ENCSR430JGJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR430JGJ [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens THRB" and target="THRB"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens THRB output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN785KNS|/analyses/ENCAN785KNS/} has in progress subobject document {00289696-5e74-40b8-be82-cfa557d0c9cc|/documents/00289696-5e74-40b8-be82-cfa557d0c9cc/} audit_internal_action: Released analysis {ENCAN785KNS|/analyses/ENCAN785KNS/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF102ZUM|/files/ENCFF102ZUM/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.35 and a self consistency ratio of 3.27. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR430JGJ | float |
TF_ChIP-seq_ENCSR430JGJ |
TF_ChIP-seq ENCSR430JGJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens THRB" and target="THRB"]
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[7.18, 645] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF102ZUM.bed.gz | 266.58 KB | 19b489c868a24621a81c09f0cc3eade1 |
| ENCFF102ZUM.bed.gz.dvc | 100.0 B | a1e24b4f2a972b2ab9fe7f2d09ad96fd |
| ENCFF102ZUM.tabix.bed.gz | 208.93 KB | d7ece3bdf5432ec793ac72d85ba4189b |
| ENCFF102ZUM.tabix.bed.gz.dvc | 106.0 B | 2c3a9c80425e4d7c25142f5df767df0e |
| ENCFF102ZUM.tabix.bed.gz.tbi | 102.7 KB | 5018de733f387eaab27e51f212d7e680 |
| ENCFF102ZUM.tabix.bed.gz.tbi.dvc | 110.0 B | 49af9c45191bee1f3448b05dd5b82aee |
| genomic_resource.yaml | 2.42 KB | 3efb49c8dc76d6eeebfa8e3569ad3f82 |
| genomic_resource_original.yaml | 2.26 KB | 3f3b47e58c24d16eb1e386908f1517f0 |
| statistics/ |