| Id: | TF_ChIP-seq/ENCSR419CNA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR419CNA [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4" and target="ZC3H4"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN007MSH|/analyses/ENCAN007MSH/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF270TMW|/files/ENCFF270TMW/} processed by ChIP-seq ENCODE4 v1.9.0 GRCh38 pipeline have a rescue ratio of 1.56 and a self consistency ratio of 2.53. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR419CNA | float |
TF_ChIP-seq_ENCSR419CNA |
TF_ChIP-seq ENCSR419CNA [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4" and target="ZC3H4"]
|
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[10.9, 360] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF270TMW.bed.gz | 92.73 KB | e7b2f2d8e419a9398b3411c280296f21 |
| ENCFF270TMW.bed.gz.dvc | 99.0 B | e0a998aff13773dede31bcc7928d7f3c |
| ENCFF270TMW.tabix.bed.gz | 67.19 KB | 9438f6b738c388eabe21958599e28b22 |
| ENCFF270TMW.tabix.bed.gz.dvc | 105.0 B | 8ce13149e7b9151d3219e431f49bfe50 |
| ENCFF270TMW.tabix.bed.gz.tbi | 36.07 KB | d00f74556ab57a485ba3817eb69aead4 |
| ENCFF270TMW.tabix.bed.gz.tbi.dvc | 109.0 B | c11eccfd6d68c3f044cfe3f96a727414 |
| genomic_resource.yaml | 2.22 KB | 25985f0252e66f5915092f5068b15cef |
| genomic_resource_original.yaml | 2.05 KB | 7910ddef75b767c7efd421fcd0682119 |
| statistics/ |