| Id: | TF_ChIP-seq/ENCSR418XXL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR418XXL [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using CRISPR targeting H. sapiens HOXD13" and target="HOXD13"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens HOXD13 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN082XVG|/analyses/ENCAN082XVG/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF223BOC|/files/ENCFF223BOC/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline have a rescue ratio of 1.21 and a self consistency ratio of 2.24. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR418XXL | float |
TF_ChIP-seq_ENCSR418XXL |
TF_ChIP-seq ENCSR418XXL [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using CRISPR targeting H. sapiens HOXD13" and target="HOXD13"]
|
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[9.55, 428] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF223BOC.bed.gz | 78.81 KB | 1c2a8c6feaa02c2a2174f1b4a2cbb3db |
| ENCFF223BOC.bed.gz.dvc | 99.0 B | 78009bd0147808f07b386778bfa54e29 |
| ENCFF223BOC.tabix.bed.gz | 54.03 KB | 0398cf7dbd52eb68267952dad5f578bc |
| ENCFF223BOC.tabix.bed.gz.dvc | 105.0 B | f0accf817591d0b2dba9e9f261e1c86b |
| ENCFF223BOC.tabix.bed.gz.tbi | 40.92 KB | ed3e0d337de5695096252e17cf256f50 |
| ENCFF223BOC.tabix.bed.gz.tbi.dvc | 109.0 B | e021577444994a01f251e7a43570074e |
| genomic_resource.yaml | 2.23 KB | 0b955e72f960b03065791cdf2b30a25d |
| genomic_resource_original.yaml | 2.06 KB | e684c859682d31a80b1af43223369547 |
| statistics/ |