TF_ChIP-seq_ENCSR415AEB
TF_ChIP-seq ENCSR415AEB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF48" and target="ZNF48"]
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| Id: | TF_ChIP-seq/ENCSR415AEB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR415AEB [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF48" and target="ZNF48"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZNF48 output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF179NMB|/files/ENCFF179NMB/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN413VCR|/analyses/ENCAN413VCR/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF225MMJ|/files/ENCFF225MMJ/}, {ENCFF623WIB|/files/ENCFF623WIB/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.63 and a self consistency ratio of 3.94. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF622EUH|/files/ENCFF622EUH/}, {ENCFF179NMB|/files/ENCFF179NMB/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.63 and a self consistency ratio of 3.94. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR415AEB | float |
TF_ChIP-seq_ENCSR415AEB |
TF_ChIP-seq ENCSR415AEB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF48" and target="ZNF48"]
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[11.6, 602] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF179NMB.bed.gz | 584.71 KB | 1c358b4723933cd381e9fe37752281fb |
| ENCFF179NMB.bed.gz.dvc | 100.0 B | d2eb831e7c24107bf9718c1e2c0ec40b |
| ENCFF179NMB.tabix.bed.gz | 469.46 KB | 1d8e24e658d6b69acbb8a982c4bae23d |
| ENCFF179NMB.tabix.bed.gz.dvc | 106.0 B | 2fe92ebdcdf75d570cfb5879543548e6 |
| ENCFF179NMB.tabix.bed.gz.tbi | 156.94 KB | ade0be134c247fd1fb25cd3165175de9 |
| ENCFF179NMB.tabix.bed.gz.tbi.dvc | 110.0 B | 3f20dc2cef098a2532cef93d7ac6ff02 |
| genomic_resource.yaml | 2.99 KB | 077fdbe8f6b0706d59dc80fa54faac4c |
| genomic_resource_original.yaml | 2.82 KB | c5efc80e609d6cd9d2ee59f998a2af13 |
| statistics/ |