TF_ChIP-seq_ENCSR403MJY
TF_ChIP-seq ENCSR403MJY [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF281" and target="ZNF281"]
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| Id: | TF_ChIP-seq/ENCSR403MJY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR403MJY [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF281" and target="ZNF281"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZNF281 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN845IBH|/analyses/ENCAN845IBH/} has in progress subobject document {99526781-11ba-4da3-8d01-690af8560387|/documents/99526781-11ba-4da3-8d01-690af8560387/} audit_internal_action: Released analysis {ENCAN845IBH|/analyses/ENCAN845IBH/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF964FPZ|/files/ENCFF964FPZ/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.75 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF585QNU|/files/ENCFF585QNU/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.75 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR403MJY | float |
TF_ChIP-seq_ENCSR403MJY |
TF_ChIP-seq ENCSR403MJY [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF281" and target="ZNF281"]
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[6.87, 467] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF964FPZ.bed.gz | 360.48 KB | 377b8cecc3f09b3f3dbb5d87e72dfdc4 |
| ENCFF964FPZ.bed.gz.dvc | 100.0 B | c758db85cba627b2170f604c28f8ec49 |
| ENCFF964FPZ.tabix.bed.gz | 275.94 KB | d5ed164a761a424ba03513af60ad79fd |
| ENCFF964FPZ.tabix.bed.gz.dvc | 106.0 B | 46acdf5aa9cf2eee0d6f182cf92d698a |
| ENCFF964FPZ.tabix.bed.gz.tbi | 138.97 KB | 90d6b88dcc5de127e75b0f266ef80802 |
| ENCFF964FPZ.tabix.bed.gz.tbi.dvc | 110.0 B | 741d393ced57da7cb4b586bb6ee57716 |
| genomic_resource.yaml | 2.96 KB | b41a0f7140fb1f08977340600c3c591d |
| genomic_resource_original.yaml | 2.79 KB | e25a089757fbd131a15dabf50345ca36 |
| statistics/ |