TF_ChIP-seq_ENCSR401VBM
TF_ChIP-seq ENCSR401VBM [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZHX2" and target="ZHX2"]
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| Id: | TF_ChIP-seq/ENCSR401VBM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR401VBM [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZHX2" and target="ZHX2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZHX2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN379RTX|/analyses/ENCAN379RTX/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF226FPR|/files/ENCFF226FPR/} processed by ChIP-seq ENCODE4 v1.9.0 GRCh38 pipeline have a rescue ratio of 1.57 and a self consistency ratio of 2.41. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR401VBM | float |
TF_ChIP-seq_ENCSR401VBM |
TF_ChIP-seq ENCSR401VBM [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZHX2" and target="ZHX2"]
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[9.82, 448] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF226FPR.bed.gz | 125.31 KB | 92dce343bf131ffd38a81affd2ecb0df |
| ENCFF226FPR.bed.gz.dvc | 100.0 B | bfed9647462925c44ed0eb4672a4d3a4 |
| ENCFF226FPR.tabix.bed.gz | 92.06 KB | 42a38aa884f2b8f9b46cd2d9edd2daf8 |
| ENCFF226FPR.tabix.bed.gz.dvc | 105.0 B | 6230ca5cbdd56ce649a6cf1974882114 |
| ENCFF226FPR.tabix.bed.gz.tbi | 51.06 KB | 8a0aa4b99c24ee2143311946249d785e |
| ENCFF226FPR.tabix.bed.gz.tbi.dvc | 109.0 B | 779ecd7677fee3e32fe552206b02dda0 |
| genomic_resource.yaml | 2.21 KB | dd06c82be5dbc3a469c242375112d24b |
| genomic_resource_original.yaml | 2.05 KB | 4ecfd69f0f78af719b5a8c185a87c520 |
| statistics/ |