TF_ChIP-seq_ENCSR396QWK
TF_ChIP-seq ENCSR396QWK [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MBD1" and target="MBD1"]
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| Id: | TF_ChIP-seq/ENCSR396QWK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR396QWK [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MBD1" and target="MBD1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MBD1 output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF515DUD|/files/ENCFF515DUD/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN837PQU|/analyses/ENCAN837PQU/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF615LVR|/files/ENCFF615LVR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 17932737 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting MBD1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR396QWK | float |
TF_ChIP-seq_ENCSR396QWK |
TF_ChIP-seq ENCSR396QWK [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MBD1" and target="MBD1"]
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[8.46, 256] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF515DUD.bed.gz | 198.69 KB | 26760894aa3b4e6921f5ef6f075c235f |
| ENCFF515DUD.bed.gz.dvc | 100.0 B | 22f9c03930521d408d7a8e7a0791ce2b |
| ENCFF515DUD.tabix.bed.gz | 148.6 KB | 98f6bd0bc15e4a17e0a7d658143eba97 |
| ENCFF515DUD.tabix.bed.gz.dvc | 106.0 B | b64b0ae42243bd1f6264d6ec8730cd89 |
| ENCFF515DUD.tabix.bed.gz.tbi | 78.08 KB | 65ff1344725780344027596e7825c364 |
| ENCFF515DUD.tabix.bed.gz.tbi.dvc | 109.0 B | f6423c1fc95cbfa22481766a1b7b2d38 |
| genomic_resource.yaml | 2.36 KB | 4659ca0b0880455ad438cee7da5a081d |
| genomic_resource_original.yaml | 2.2 KB | 65a5f36eda3fbb926ad390bf849ddc1b |
| statistics/ |