TF_ChIP-seq_ENCSR360UHC
TF_ChIP-seq ENCSR360UHC [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ARID3B" and target="ARID3B"]
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| Id: | TF_ChIP-seq/ENCSR360UHC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR360UHC [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ARID3B" and target="ARID3B"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ARID3B output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN037JLA|/analyses/ENCAN037JLA/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN037JLA|/analyses/ENCAN037JLA/} has in progress subobject document {91a2a1d8-2bcb-4e71-874a-f52eab4697ef|/documents/91a2a1d8-2bcb-4e71-874a-f52eab4697ef/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF270TSN|/files/ENCFF270TSN/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.14 and a self consistency ratio of 3.37. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF224SWC|/files/ENCFF224SWC/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.14 and a self consistency ratio of 3.37. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR360UHC | float |
TF_ChIP-seq_ENCSR360UHC |
TF_ChIP-seq ENCSR360UHC [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ARID3B" and target="ARID3B"]
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[16.3, 711] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF270TSN.bed.gz | 50.56 KB | b8b2697e68293c9d01670c39acd2cbe2 |
| ENCFF270TSN.bed.gz.dvc | 99.0 B | 1da402a79660363b9f1dfc66edfd24a4 |
| ENCFF270TSN.tabix.bed.gz | 32.21 KB | 8fb07ebac6730682b30f0fe0ae5c3648 |
| ENCFF270TSN.tabix.bed.gz.dvc | 105.0 B | 3b33b5cc4cca8c3303e0d4ce42d5bb5b |
| ENCFF270TSN.tabix.bed.gz.tbi | 25.19 KB | 78f08a68ddb096274ffbb1134f8874c6 |
| ENCFF270TSN.tabix.bed.gz.tbi.dvc | 109.0 B | cf4efbbc49d986d3775ba27e4031dde9 |
| genomic_resource.yaml | 2.96 KB | d3d0aa850c7a029cc9d84f76efd93ffb |
| genomic_resource_original.yaml | 2.79 KB | afec7ada637d42ceb0cad46c431b6ba7 |
| statistics/ |