TF_ChIP-seq_ENCSR340BXT
TF_ChIP-seq ENCSR340BXT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KAT7" and target="KAT7"]
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| Id: | TF_ChIP-seq/ENCSR340BXT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR340BXT [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KAT7" and target="KAT7"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens KAT7 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN289PXR|/analyses/ENCAN289PXR/} has in progress subobject document {38da1be0-8de4-4189-9617-67f898eb3b75|/documents/38da1be0-8de4-4189-9617-67f898eb3b75/} audit_internal_action: Released analysis {ENCAN289PXR|/analyses/ENCAN289PXR/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF199NUD|/files/ENCFF199NUD/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.32 and a self consistency ratio of 2.28. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR340BXT | float |
TF_ChIP-seq_ENCSR340BXT |
TF_ChIP-seq ENCSR340BXT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KAT7" and target="KAT7"]
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[8.11, 232] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF199NUD.bed.gz | 322.25 KB | af422e5f2e44e64b8c7f2a8931c10fee |
| ENCFF199NUD.bed.gz.dvc | 100.0 B | 985e938b435704adc75dc84724d54462 |
| ENCFF199NUD.tabix.bed.gz | 264.25 KB | 5152deaf2894d0cda4a8e3c16fe352d6 |
| ENCFF199NUD.tabix.bed.gz.dvc | 106.0 B | 09053dfdb36c4f69cc69f7160021e149 |
| ENCFF199NUD.tabix.bed.gz.tbi | 99.14 KB | 347b5b79743c06107b1d2a1950e73500 |
| ENCFF199NUD.tabix.bed.gz.tbi.dvc | 110.0 B | c16fde113d7d3f65a3d1fabd887bc82f |
| genomic_resource.yaml | 2.42 KB | e260be441744466500d533293feb4675 |
| genomic_resource_original.yaml | 2.26 KB | c24789d8033d6dbaf462ea88a761bcd3 |
| statistics/ |