| Id: | TF_ChIP-seq/ENCSR337NQP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR337NQP [biosamplesummary="Homo sapiens MCF-7" and target="ESRRA"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN336ATO|/analyses/ENCAN336ATO/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF498RJI|/files/ENCFF498RJI/}, {ENCFF193FZK|/files/ENCFF193FZK/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.70 and a self consistency ratio of 1.11. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF349JNR|/files/ENCFF349JNR/}, {ENCFF780HUV|/files/ENCFF780HUV/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.70 and a self consistency ratio of 1.11. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR337NQP | float |
TF_ChIP-seq_ENCSR337NQP |
TF_ChIP-seq ENCSR337NQP [biosample_summary="Homo sapiens MCF-7" and target="ESRRA"]
|
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[11.5, 245] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF193FZK.bed.gz | 36.89 KB | 6d8a2ae1b22bb8666ac032eee0fec1c5 |
| ENCFF193FZK.bed.gz.dvc | 99.0 B | e7617a02e5e9b05be4ee8ccbac7fe50e |
| ENCFF193FZK.tabix.bed.gz | 24.17 KB | 2a02fa8acf56a6d192bf7afdff459d92 |
| ENCFF193FZK.tabix.bed.gz.dvc | 105.0 B | 170824f2f263a0276ff871e00341e5d8 |
| ENCFF193FZK.tabix.bed.gz.tbi | 18.71 KB | 3ba8aa6374a5c43bb0be00c90b74241c |
| ENCFF193FZK.tabix.bed.gz.tbi.dvc | 109.0 B | f51a067e571b77f0528b98092be9f031 |
| genomic_resource.yaml | 3.02 KB | e917ada04f8b6898f635c21a8f08cf76 |
| genomic_resource_original.yaml | 2.92 KB | 1b0287bf541419f221f2c400563f6939 |
| statistics/ |