TF_ChIP-seq_ENCSR331HWO
TF_ChIP-seq ENCSR331HWO [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB1" and target="ZBTB1"]
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| Id: | TF_ChIP-seq/ENCSR331HWO |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR331HWO [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB1" and target="ZBTB1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB1 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN529YGT|/analyses/ENCAN529YGT/} has in progress subobject document {1ef021db-4260-498b-8a75-8fb7c5e2502d|/documents/1ef021db-4260-498b-8a75-8fb7c5e2502d/} audit_internal_action: Released analysis {ENCAN529YGT|/analyses/ENCAN529YGT/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF643FQU|/files/ENCFF643FQU/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.27 and a self consistency ratio of 5.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF080BHY|/files/ENCFF080BHY/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.27 and a self consistency ratio of 5.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR331HWO | float |
TF_ChIP-seq_ENCSR331HWO |
TF_ChIP-seq ENCSR331HWO [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB1" and target="ZBTB1"]
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[7.04, 349] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF643FQU.bed.gz | 35.3 KB | b617ab2d86354ad96ead34f3f7b3bd41 |
| ENCFF643FQU.bed.gz.dvc | 99.0 B | 63763f124b2609c159bbeba630385fa3 |
| ENCFF643FQU.tabix.bed.gz | 24.24 KB | 608054f594669e520858873a3e6c8a58 |
| ENCFF643FQU.tabix.bed.gz.dvc | 105.0 B | fb8fcaac3fbf0435b07c8d4d34da940d |
| ENCFF643FQU.tabix.bed.gz.tbi | 21.49 KB | fb43699a65c5e55a411d6e6f9e1466e2 |
| ENCFF643FQU.tabix.bed.gz.tbi.dvc | 109.0 B | 491a6af54d32d7735a68903f61548f3e |
| genomic_resource.yaml | 2.95 KB | fd5d68e7df3f3004a346535ae7fd423b |
| genomic_resource_original.yaml | 2.79 KB | 642a9c9f8d10092123c97f7a1a113c19 |
| statistics/ |