TF_ChIP-seq_ENCSR294JWV
TF_ChIP-seq ENCSR294JWV [biosample_summary="Homo sapiens A549" and target="ZFP36"]
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| Id: | TF_ChIP-seq/ENCSR294JWV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR294JWV [biosamplesummary="Homo sapiens A549" and target="ZFP36"] |
| Description: |
status: released biological_replicates: Rep 2, Rep 3 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN402ZZX|/analyses/ENCAN402ZZX/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF137JHO|/files/ENCFF137JHO/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF678CGL|/files/ENCFF678CGL/}, {ENCFF137JHO|/files/ENCFF137JHO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.69 and a self consistency ratio of 2.60. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF970SRA|/files/ENCFF970SRA/}, {ENCFF340TTL|/files/ENCFF340TTL/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.69 and a self consistency ratio of 2.60. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR294JWV | float |
TF_ChIP-seq_ENCSR294JWV |
TF_ChIP-seq ENCSR294JWV [biosample_summary="Homo sapiens A549" and target="ZFP36"]
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[14, 3.17e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF137JHO.bed.gz | 203.24 KB | 0e9a992a2b7997ff20f4923ff2f1a1eb |
| ENCFF137JHO.bed.gz.dvc | 100.0 B | 76fa90866538cfc1dea333bc70058887 |
| ENCFF137JHO.tabix.bed.gz | 136.86 KB | 7decfa27eede363d3ee618bd655a9125 |
| ENCFF137JHO.tabix.bed.gz.dvc | 106.0 B | 56803b3cb76c41e6c35e736d9cc75842 |
| ENCFF137JHO.tabix.bed.gz.tbi | 88.51 KB | 5d0706bbe34a68a1b91c8bfe3ed4e7c9 |
| ENCFF137JHO.tabix.bed.gz.tbi.dvc | 109.0 B | a61a2fec28d23185b2f8e9a2317b3b54 |
| genomic_resource.yaml | 3.2 KB | 75da45b4f69566cda768853830f706fb |
| genomic_resource_original.yaml | 3.11 KB | 230641dc98a7cf1898f80bf0d56b3821 |
| statistics/ |