type: position_score
table:
  filename: ENCFF808WST.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR290ZOS
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR290ZOS [TISSUE: Homo sapiens liver tissue female child (4
    years), TARGET: EGR1]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: female child (4 years)


    **output\_type**: optimal IDR thresholded peaks


    **audit\_internal\_action**: File {ENCFF808WST|/files/ENCFF808WST/} with status
    ''released'' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status
    ''archived''.


    **audit\_internal\_action**: Archived analysis {ENCAN387FLA|/analyses/ENCAN387FLA/}
    has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/}


    **audit\_warning**: Processed alignments file {ENCFF960VKL|/files/ENCFF960VKL/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 16541630 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    EGR1-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )


    **audit\_warning**: Processed alignments file {ENCFF439AQO|/files/ENCFF439AQO/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 16416836 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    EGR1-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR290ZOS
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: female child (4 years)
    biosample_summary: Homo sapiens liver tissue female child (4 years)
    replication_type: isogenic
    biosample_ontology: /biosample-types/tissue_UBERON_0002107/
    perturbed: false
    doi: 10.17989/ENCSR290ZOS
    date_created: '2015-09-29T16:19:03.868385+00:00'
    date_released: '2018-02-08'
    submitter_comment: 'This experiment is being used in the ENCODE-DREAM Transcription
      Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026).
      The files will be unavailable until after the challenge completes on 09-30-16.
      UPDATE: There will be a second round to the challenge that is expected to end
      on 01-11-2017'
    target: EGR1
