type: position_score
table:
  filename: ENCFF889XXJ.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR290MUH
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR290MUH [biosample_summary="Homo sapiens K562 stably expressing GABPA" and target="GABPA"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR290MUH [biosample_summary="Homo sapiens K562 stably expressing GABPA" and target="GABPA"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: stably expressing C-terminal eGFP-tagged GABPA


    **output\_type**: conservative IDR thresholded peaks


    **audit\_internal\_action**: Released analysis {ENCAN097ITY|/analyses/ENCAN097ITY/}
    has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}


    **audit\_internal\_action**: Released analysis {ENCAN097ITY|/analyses/ENCAN097ITY/}
    has in progress subobject document {b209286d-5706-4bb7-be74-a6ef3b3690d2|/documents/b209286d-5706-4bb7-be74-a6ef3b3690d2/}


    **audit\_warning**: Processed alignments file {ENCFF201FAY|/files/ENCFF201FAY/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 17618528 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    GABPA-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR290MUH
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: stably expressing C-terminal eGFP-tagged GABPA
    biosample_summary: Homo sapiens K562 stably expressing GABPA
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002067/
    perturbed: false
    doi: 10.17989/ENCSR290MUH
    date_created: '2016-03-11T20:50:34.364993+00:00'
    date_released: '2016-06-13'
    submitter_comment: ''
    target: GABPA
