TF_ChIP-seq_ENCSR282ZLP
TF_ChIP-seq ENCSR282ZLP [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens JUND" and target="JUND"]
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| Id: | TF_ChIP-seq/ENCSR282ZLP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR282ZLP [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens JUND" and target="JUND"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens JUND output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN315PIU|/analyses/ENCAN315PIU/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where two reads map uniquely (M2). A PBC2 value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking, 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended, but > 3 is acceptable. ENCODE processed alignments file {ENCFF574DLO|/files/ENCFF574DLO/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline was generated from a library with PBC2 value of 9.96. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR282ZLP | float |
TF_ChIP-seq_ENCSR282ZLP |
TF_ChIP-seq ENCSR282ZLP [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens JUND" and target="JUND"]
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[8.97, 450] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF383BYS.bed.gz | 228.52 KB | 91cc9e5aad4f990aae2f15131e084757 |
| ENCFF383BYS.bed.gz.dvc | 100.0 B | 9a8aad43c20aefade60f52951a596f06 |
| ENCFF383BYS.tabix.bed.gz | 165.13 KB | 762581773f513c2a10a07d2d39b50fb2 |
| ENCFF383BYS.tabix.bed.gz.dvc | 106.0 B | ed369ee62c7493dfe69475352f454a51 |
| ENCFF383BYS.tabix.bed.gz.tbi | 91.88 KB | 9d7438e4610a4688111a17a9c4ad14e5 |
| ENCFF383BYS.tabix.bed.gz.tbi.dvc | 109.0 B | 6578be6e6cde2805f53eb973095252c2 |
| genomic_resource.yaml | 2.31 KB | 29f9955a3036f642703553f9fda19375 |
| genomic_resource_original.yaml | 2.15 KB | a7e278f1938262f37e8b285a485d7c51 |
| statistics/ |