| Id: | TF_ChIP-seq/ENCSR279IEM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR279IEM [biosamplesummary="Homo sapiens MCF-7" and target="SIX4"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN016IKM|/analyses/ENCAN016IKM/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN016IKM|/analyses/ENCAN016IKM/} has in progress subobject document {2fb5fe10-ef11-4abf-abf0-0a7f072d615e|/documents/2fb5fe10-ef11-4abf-abf0-0a7f072d615e/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF728MNA|/files/ENCFF728MNA/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.20 and a self consistency ratio of 2.06. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR279IEM | float |
TF_ChIP-seq_ENCSR279IEM |
TF_ChIP-seq ENCSR279IEM [biosample_summary="Homo sapiens MCF-7" and target="SIX4"]
|
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[20.7, 5.33e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF728MNA.bed.gz | 41.07 KB | 8362205c425e67733564b4edb6d440f6 |
| ENCFF728MNA.bed.gz.dvc | 99.0 B | 4ef33d03a61b1ab59d0296a6a3fc9444 |
| ENCFF728MNA.tabix.bed.gz | 27.67 KB | 7b27a2425f8b00b0086784da9ee6ca78 |
| ENCFF728MNA.tabix.bed.gz.dvc | 105.0 B | d566598043fb8315605e6e026f928fa6 |
| ENCFF728MNA.tabix.bed.gz.tbi | 21.48 KB | f6968719fb896cfb513ec816aab65127 |
| ENCFF728MNA.tabix.bed.gz.tbi.dvc | 109.0 B | df8cae3742fca3f080d48bdb61e02df0 |
| genomic_resource.yaml | 2.1 KB | 57165203d7d5629e0ff9d15d729b4f5c |
| genomic_resource_original.yaml | 2.0 KB | 2f2a20a6497f15603be1f6fb0498705a |
| statistics/ |