TF_ChIP-seq_ENCSR278JQG
TF_ChIP-seq ENCSR278JQG [biosample_summary="Homo sapiens HepG2" and target="IKZF1"]
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| Id: | TF_ChIP-seq/ENCSR278JQG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR278JQG [biosamplesummary="Homo sapiens HepG2" and target="IKZF1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF969BZA|/files/ENCFF969BZA/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN984CDS|/analyses/ENCAN984CDS/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF632RQY|/files/ENCFF632RQY/}, {ENCFF969BZA|/files/ENCFF969BZA/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.36 and a self consistency ratio of 1.89. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF644CXU|/files/ENCFF644CXU/}, {ENCFF391LAG|/files/ENCFF391LAG/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.36 and a self consistency ratio of 1.89. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR278JQG | float |
TF_ChIP-seq_ENCSR278JQG |
TF_ChIP-seq ENCSR278JQG [biosample_summary="Homo sapiens HepG2" and target="IKZF1"]
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[12.6, 1.89e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF969BZA.bed.gz | 52.96 KB | b654f3e0682bccf4f54a5752be941aca |
| ENCFF969BZA.bed.gz.dvc | 99.0 B | 3b19be791a2a804b6d9cb598b5482887 |
| ENCFF969BZA.tabix.bed.gz | 34.69 KB | 19795fa77c3cc3b27b028f44b4070804 |
| ENCFF969BZA.tabix.bed.gz.dvc | 105.0 B | 61ba3183e045c5d79433574a9f6a9b75 |
| ENCFF969BZA.tabix.bed.gz.tbi | 27.83 KB | fb0bae303d96e8b43d57f97443f43039 |
| ENCFF969BZA.tabix.bed.gz.tbi.dvc | 109.0 B | 8acccff2ce40773ade8bfae6ee04ff99 |
| genomic_resource.yaml | 2.66 KB | d0219b8ddfd1a1c7e189b5f01059f0ea |
| genomic_resource_original.yaml | 2.57 KB | de6ba72e7c4d1e26c8397c7bfd804f32 |
| statistics/ |