TF_ChIP-seq_ENCSR269BSA
TF_ChIP-seq ENCSR269BSA [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens MED1" and target="MED1"]
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| Id: | TF_ChIP-seq/ENCSR269BSA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR269BSA [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens MED1" and target="MED1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MED1 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN728NSL|/analyses/ENCAN728NSL/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF882ZEN|/files/ENCFF882ZEN/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline have a rescue ratio of 1.78 and a self consistency ratio of 2.35. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR269BSA | float |
TF_ChIP-seq_ENCSR269BSA |
TF_ChIP-seq ENCSR269BSA [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens MED1" and target="MED1"]
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[8.8, 179] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF882ZEN.bed.gz | 29.04 KB | 6e2d95977cfa1af407ca7e8f83be4aae |
| ENCFF882ZEN.bed.gz.dvc | 99.0 B | 0955fa9723e6a697209b864f6bb4ed7d |
| ENCFF882ZEN.tabix.bed.gz | 20.27 KB | 36ff85d2be968b56d41e5f0664f8dc2a |
| ENCFF882ZEN.tabix.bed.gz.dvc | 105.0 B | 35c8908a9ee6821869b4a761abdde681 |
| ENCFF882ZEN.tabix.bed.gz.tbi | 15.32 KB | b6c235e80be4a8603b5959470fc60fc9 |
| ENCFF882ZEN.tabix.bed.gz.tbi.dvc | 109.0 B | 5ab375304a36a8e3d9caf72656b2bed2 |
| genomic_resource.yaml | 2.21 KB | d6027ad683e64f5458dd8a1367e43bb1 |
| genomic_resource_original.yaml | 2.05 KB | ab4bc513546a98bea1bfbc35ff57c092 |
| statistics/ |