TF_ChIP-seq_ENCSR237RPW
TF_ChIP-seq ENCSR237RPW [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF326" and target="ZNF326"]
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| Id: | TF_ChIP-seq/ENCSR237RPW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR237RPW [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF326" and target="ZNF326"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZNF326 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN946ENM|/analyses/ENCAN946ENM/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN946ENM|/analyses/ENCAN946ENM/} has in progress subobject document {5a7133af-6e30-4d67-828e-2f5723a8937e|/documents/5a7133af-6e30-4d67-828e-2f5723a8937e/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF541FQS|/files/ENCFF541FQS/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.18 and a self consistency ratio of 2.03. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF956MZA|/files/ENCFF956MZA/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.18 and a self consistency ratio of 2.03. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR237RPW | float |
TF_ChIP-seq_ENCSR237RPW |
TF_ChIP-seq ENCSR237RPW [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF326" and target="ZNF326"]
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[6.88, 242] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF541FQS.bed.gz | 31.34 KB | a4bd537cffb9e886f0f35bc4607a0178 |
| ENCFF541FQS.bed.gz.dvc | 99.0 B | f8319df33a0d0dc8efcac77cfaa2e1c3 |
| ENCFF541FQS.tabix.bed.gz | 23.25 KB | fa5b77fd3c082c12d2461aab9a4bc3dc |
| ENCFF541FQS.tabix.bed.gz.dvc | 105.0 B | 829a6dd11e909b3a9101a2620b904639 |
| ENCFF541FQS.tabix.bed.gz.tbi | 17.56 KB | 53ee5205f4a5093cfa4cf20f8715c880 |
| ENCFF541FQS.tabix.bed.gz.tbi.dvc | 109.0 B | d6c41fc10e5f3168203d2e1808c1170f |
| genomic_resource.yaml | 2.96 KB | 1e120491f6d966c3f292df3663b34c02 |
| genomic_resource_original.yaml | 2.79 KB | 7918ed65a801d16a26dcecce965b2a86 |
| statistics/ |