type: position_score
table:
  filename: ENCFF689XUB.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR219MKK
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR219MKK [biosample_summary="Homo sapiens HeLa-S3" and target="DEK"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR219MKK [biosample_summary="Homo sapiens HeLa-S3" and target="DEK"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: IDR thresholded peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN758IZL|/analyses/ENCAN758IZL/} has in progress\
    \ subobject document {b2955042-438c-4e2b-bfa9-45909aa0d338|/documents/b2955042-438c-4e2b-bfa9-45909aa0d338/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN758IZL|/analyses/ENCAN758IZL/}\
    \ has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}\n\
    \n**audit\\_warning**: Processed alignments file {ENCFF502FEG|/files/ENCFF502FEG/}\
    \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 13947714 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ DEK-human and investigated as a transcription factor is 10 million usable fragments.\
    \ The recommended value is > 20 million, but > 10 million is acceptable. (See\
    \ {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} )"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR219MKK
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens HeLa-S3
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002791/
    perturbed: false
    doi: 10.17989/ENCSR219MKK
    date_created: '2014-07-30T21:36:07.771054+00:00'
    date_released: '2016-04-21'
    submitter_comment: As of June 2013, ENCODE has ceased work on the HeLa cell line.
      Though these data were released in 2016, the samples were prepared and sequenced
      in 2010.
    target: DEK
