| Id: | TF_ChIP-seq/ENCSR217WRC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR217WRC [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens TSHZ1" and target="TSHZ1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using site-specific recombination targeting H. sapiens TSHZ1 output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN296DQI|/analyses/ENCAN296DQI/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF355MAL|/files/ENCFF355MAL/}, {ENCFF206SGM|/files/ENCFF206SGM/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 1.84 and a self consistency ratio of 2.06. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF566YKE|/files/ENCFF566YKE/}, {ENCFF935VFO|/files/ENCFF935VFO/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 1.84 and a self consistency ratio of 2.06. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR217WRC | float |
TF_ChIP-seq_ENCSR217WRC |
TF_ChIP-seq ENCSR217WRC [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens TSHZ1" and target="TSHZ1"]
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[13.2, 733] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF355MAL.bed.gz | 221.53 KB | eb53a8a15dad4f1cb4fd57d7c2735e59 |
| ENCFF355MAL.bed.gz.dvc | 100.0 B | e62c2e1a6bd448295f6f2e9eb174708b |
| ENCFF355MAL.tabix.bed.gz | 149.0 KB | 06724d56a8ae6844b433893d769c204d |
| ENCFF355MAL.tabix.bed.gz.dvc | 106.0 B | 48363ef7ec955a407a065a1112e3e559 |
| ENCFF355MAL.tabix.bed.gz.tbi | 93.33 KB | 8c8275217c4444b6503407050368e4f5 |
| ENCFF355MAL.tabix.bed.gz.tbi.dvc | 109.0 B | 78a0b7aca23db3b1723ca2c27478ed22 |
| genomic_resource.yaml | 2.9 KB | e64884c78d740715232b7f22af62c3d5 |
| genomic_resource_original.yaml | 2.72 KB | 2bf06bc8a118291ed773a9f1736948c1 |
| statistics/ |