type: position_score
table:
  filename: ENCFF690GOL.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR217KAL
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR217KAL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="POLR2AphosphoS5"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR217KAL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="POLR2AphosphoS5"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1


    **summary**: male adult (37 years)


    **output\_type**: IDR thresholded peaks


    **audit\_internal\_action**: Released analysis {ENCAN683LDM|/analyses/ENCAN683LDM/}
    has in progress subobject document {b6bdc637-2eef-4abf-ad0f-18ab2da0c932|/documents/b6bdc637-2eef-4abf-ad0f-18ab2da0c932/}


    **audit\_internal\_action**: Released analysis {ENCAN683LDM|/analyses/ENCAN683LDM/}
    has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}


    **audit\_warning**: Processed alignments file {ENCFF986CVS|/files/ENCFF986CVS/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 11260545 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    POLR2AphosphoS5-human and investigated as a transcription factor is 10 million
    usable fragments. The recommended value is > 20 million, but > 10 million is acceptable.
    (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR217KAL
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: male adult (37 years)
    biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult
      (37 years)
    replication_type: unreplicated
    biosample_ontology: /biosample-types/tissue_UBERON_0004648/
    perturbed: false
    doi: 10.17989/ENCSR217KAL
    date_created: '2017-01-31T16:16:26.297550+00:00'
    date_released: '2018-03-06'
    submitter_comment: ''
    target: POLR2AphosphoS5
