TF_ChIP-seq_ENCSR213VUI
TF_ChIP-seq ENCSR213VUI [biosample_summary="Homo sapiens K562" and target="TRIM25"]
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| Id: | TF_ChIP-seq/ENCSR213VUI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR213VUI [biosamplesummary="Homo sapiens K562" and target="TRIM25"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN205JQQ|/analyses/ENCAN205JQQ/} has in progress subobject document {3aa32035-8174-4e0b-b7f7-2adc3982e14a|/documents/3aa32035-8174-4e0b-b7f7-2adc3982e14a/} audit_internal_action: Released analysis {ENCAN205JQQ|/analyses/ENCAN205JQQ/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF448LKL|/files/ENCFF448LKL/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline have a rescue ratio of 1.39 and a self consistency ratio of 3.03. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR213VUI | float |
TF_ChIP-seq_ENCSR213VUI |
TF_ChIP-seq ENCSR213VUI [biosample_summary="Homo sapiens K562" and target="TRIM25"]
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[12.1, 2.4e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF448LKL.bed.gz | 62.02 KB | 9e6f6433ba12a9893c788cf1739b30a5 |
| ENCFF448LKL.bed.gz.dvc | 99.0 B | 86902a04e74710b07d89506942a7ba8e |
| ENCFF448LKL.tabix.bed.gz | 42.02 KB | ae9fab7194f2f8b2de3714d4cde25b56 |
| ENCFF448LKL.tabix.bed.gz.dvc | 105.0 B | 55c9c41e75ccdfd95fa33a567092be38 |
| ENCFF448LKL.tabix.bed.gz.tbi | 29.73 KB | dc93ea48462a4dc2d4f810df17ce3f83 |
| ENCFF448LKL.tabix.bed.gz.tbi.dvc | 109.0 B | 69df8acdb90581eaa0afc6965e45927b |
| genomic_resource.yaml | 2.1 KB | eacf1236e32f76bdd0dfd7f20198122f |
| genomic_resource_original.yaml | 2.0 KB | 9406f70d3b7b8bb4a5887c38391b2b0c |
| statistics/ |