| Id: | TF_ChIP-seq/ENCSR211BDR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR211BDR [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens JDP2" and target="JDP2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens JDP2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN520IFT|/analyses/ENCAN520IFT/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF552XOP|/files/ENCFF552XOP/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline have a rescue ratio of 1.92 and a self consistency ratio of 31.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR211BDR | float |
TF_ChIP-seq_ENCSR211BDR |
TF_ChIP-seq ENCSR211BDR [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens JDP2" and target="JDP2"]
|
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[7.59, 426] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF552XOP.bed.gz | 34.05 KB | fa8910d141fdf1b52ec80d0ac00a1fca |
| ENCFF552XOP.bed.gz.dvc | 99.0 B | 13adf420da8363261775230288528349 |
| ENCFF552XOP.tabix.bed.gz | 24.45 KB | 6a75fd459a4c3477d2bec9b751fb315e |
| ENCFF552XOP.tabix.bed.gz.dvc | 105.0 B | d794e4429ac2c1d0d948e305a1a96220 |
| ENCFF552XOP.tabix.bed.gz.tbi | 19.34 KB | a523573a04f24d6c82158a98827b4748 |
| ENCFF552XOP.tabix.bed.gz.tbi.dvc | 109.0 B | 3cb2dfab08ec1c7668ebc554df5ea884 |
| genomic_resource.yaml | 2.21 KB | b717a1ced6f01b36f317180429e27f80 |
| genomic_resource_original.yaml | 2.05 KB | a11bfb0b9fe27bb6992bd325e62c3816 |
| statistics/ |