TF_ChIP-seq_ENCSR180MUU
TF_ChIP-seq ENCSR180MUU [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens RREB1" and target="RREB1"]
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| Id: | TF_ChIP-seq/ENCSR180MUU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR180MUU [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens RREB1" and target="RREB1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens RREB1 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN803KGM|/analyses/ENCAN803KGM/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN803KGM|/analyses/ENCAN803KGM/} has in progress subobject document {1b4d5902-0972-42d3-aabd-75fa51fc0fcb|/documents/1b4d5902-0972-42d3-aabd-75fa51fc0fcb/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF625WYP|/files/ENCFF625WYP/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.48 and a self consistency ratio of 4.33. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF986CSN|/files/ENCFF986CSN/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.48 and a self consistency ratio of 4.33. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR180MUU | float |
TF_ChIP-seq_ENCSR180MUU |
TF_ChIP-seq ENCSR180MUU [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens RREB1" and target="RREB1"]
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[7.61, 308] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF625WYP.bed.gz | 373.79 KB | ee632ea759649f1187f376f34adea9d2 |
| ENCFF625WYP.bed.gz.dvc | 100.0 B | 0685792cca1fcb205b3031990efebe30 |
| ENCFF625WYP.tabix.bed.gz | 279.09 KB | 4b1250acb76d6b49d0f856ff6556a984 |
| ENCFF625WYP.tabix.bed.gz.dvc | 106.0 B | 2389bc42639aae4f3a694bb1cee581df |
| ENCFF625WYP.tabix.bed.gz.tbi | 134.57 KB | 0949815055c91a515f586b15ac813bf0 |
| ENCFF625WYP.tabix.bed.gz.tbi.dvc | 110.0 B | 82701f41b910702b1d878e01e6923721 |
| genomic_resource.yaml | 2.95 KB | 3843a4ef9646e4a0ec72245f9362fa0a |
| genomic_resource_original.yaml | 2.79 KB | 0961831389a213514c29a4433859c96a |
| statistics/ |