TF_ChIP-seq_ENCSR172XJS
TF_ChIP-seq ENCSR172XJS [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF165" and target="ZNF165"]
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| Id: | TF_ChIP-seq/ENCSR172XJS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR172XJS [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF165" and target="ZNF165"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZNF165 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN935XOW|/analyses/ENCAN935XOW/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN935XOW|/analyses/ENCAN935XOW/} has in progress subobject document {f4128368-8660-4f5b-96a2-b04ba5fe985b|/documents/f4128368-8660-4f5b-96a2-b04ba5fe985b/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF169QYL|/files/ENCFF169QYL/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.17 and a self consistency ratio of 2.10. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF039BMN|/files/ENCFF039BMN/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.17 and a self consistency ratio of 2.10. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR172XJS | float |
TF_ChIP-seq_ENCSR172XJS |
TF_ChIP-seq ENCSR172XJS [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF165" and target="ZNF165"]
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[17.1, 1.24e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF169QYL.bed.gz | 66.07 KB | 4c482aed84e47f4d3383d190e33458e0 |
| ENCFF169QYL.bed.gz.dvc | 99.0 B | 50496e92775270c1e4e1395ae8b243c3 |
| ENCFF169QYL.tabix.bed.gz | 43.22 KB | 92bc792c8020595ea417cb80e978b37c |
| ENCFF169QYL.tabix.bed.gz.dvc | 105.0 B | df8f116131c36060486bd56ea1f6b900 |
| ENCFF169QYL.tabix.bed.gz.tbi | 31.18 KB | 6f5ebfbdc0448985e48697ddfcf85a45 |
| ENCFF169QYL.tabix.bed.gz.tbi.dvc | 109.0 B | 7ee6b732edaa36de5b610172765426ab |
| genomic_resource.yaml | 2.96 KB | f2d72e9c4fafe48fb197bce9e38478f7 |
| genomic_resource_original.yaml | 2.79 KB | 26c7455cefb52f833afab279c9110a69 |
| statistics/ |