| Id: | TF_ChIP-seq/ENCSR170DNV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR170DNV [biosamplesummary="Homo sapiens HepG2" and target="PHB2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN748YQQ|/analyses/ENCAN748YQQ/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF882RPA|/files/ENCFF882RPA/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF190MFT|/files/ENCFF190MFT/}, {ENCFF316WXU|/files/ENCFF316WXU/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.37 and a self consistency ratio of 1.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF882RPA|/files/ENCFF882RPA/}, {ENCFF658GLG|/files/ENCFF658GLG/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.37 and a self consistency ratio of 1.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR170DNV | float |
TF_ChIP-seq_ENCSR170DNV |
TF_ChIP-seq ENCSR170DNV [biosample_summary="Homo sapiens HepG2" and target="PHB2"]
|
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[12.2, 4.28e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF882RPA.bed.gz | 35.65 KB | c39817004d204163273099a7aef015d1 |
| ENCFF882RPA.bed.gz.dvc | 99.0 B | 245913908bfa2174240c5a2d14d68087 |
| ENCFF882RPA.tabix.bed.gz | 23.25 KB | 75ec0dd5c6b830f654432af044d09ce4 |
| ENCFF882RPA.tabix.bed.gz.dvc | 105.0 B | d9bbf8a7abdbb5cf8913d7210d32dc9e |
| ENCFF882RPA.tabix.bed.gz.tbi | 20.25 KB | 347e0fdcf213bb5162077a72b6bb4faf |
| ENCFF882RPA.tabix.bed.gz.tbi.dvc | 109.0 B | ead7676de39087079b089ce38ed5581b |
| genomic_resource.yaml | 3.21 KB | 4f38b4d274d26583ae63c94b22a3906a |
| genomic_resource_original.yaml | 3.11 KB | cfa1ecccfb873e45e27dcd3dd04eb25a |
| statistics/ |