TF_ChIP-seq_ENCSR164YJZ
TF_ChIP-seq ENCSR164YJZ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens NFKB2" and target="NFKB2"]
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| Id: | TF_ChIP-seq/ENCSR164YJZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR164YJZ [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens NFKB2" and target="NFKB2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens NFKB2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN501XJQ|/analyses/ENCAN501XJQ/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN501XJQ|/analyses/ENCAN501XJQ/} has in progress subobject document {ee4a9c49-d885-4581-bc05-8bce2ca92ef5|/documents/ee4a9c49-d885-4581-bc05-8bce2ca92ef5/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF687TJX|/files/ENCFF687TJX/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.94 and a self consistency ratio of 7.86. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF165NTY|/files/ENCFF165NTY/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.94 and a self consistency ratio of 7.86. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR164YJZ | float |
TF_ChIP-seq_ENCSR164YJZ |
TF_ChIP-seq ENCSR164YJZ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens NFKB2" and target="NFKB2"]
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[11.1, 569] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF687TJX.bed.gz | 375.61 KB | 44048cc755cc0e2af68a01efd940b6ed |
| ENCFF687TJX.bed.gz.dvc | 100.0 B | 5aae4122c8ffbee7bb938845182e2585 |
| ENCFF687TJX.tabix.bed.gz | 308.71 KB | 357a281696a89958563942ba97fe87c6 |
| ENCFF687TJX.tabix.bed.gz.dvc | 106.0 B | 64f27d587fe8e008ac6834c780661444 |
| ENCFF687TJX.tabix.bed.gz.tbi | 114.79 KB | 0caabda4615e40716a66a22b4cebc8e5 |
| ENCFF687TJX.tabix.bed.gz.tbi.dvc | 110.0 B | d5024015a09f9db53197f0e29dd5c27c |
| genomic_resource.yaml | 2.95 KB | 762e5fc906ee55156e22d5f7f081b77d |
| genomic_resource_original.yaml | 2.79 KB | d847833e2e13d306bef599eb900a607b |
| statistics/ |