TF_ChIP-seq_ENCSR153HNT
TF_ChIP-seq ENCSR153HNT [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens STAG1" and target="STAG1"]
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| Id: | TF_ChIP-seq/ENCSR153HNT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR153HNT [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens STAG1" and target="STAG1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens STAG1 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN823NHJ|/analyses/ENCAN823NHJ/} has in progress subobject document {894acb5f-2e55-4724-a7db-a122e419346d|/documents/894acb5f-2e55-4724-a7db-a122e419346d/} audit_internal_action: Released analysis {ENCAN823NHJ|/analyses/ENCAN823NHJ/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF921BXP|/files/ENCFF921BXP/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.98 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF674HJF|/files/ENCFF674HJF/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.98 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR153HNT | float |
TF_ChIP-seq_ENCSR153HNT |
TF_ChIP-seq ENCSR153HNT [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens STAG1" and target="STAG1"]
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[10.7, 462] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF921BXP.bed.gz | 204.04 KB | 6a35e7af0485b7b4fde46158f09c8b92 |
| ENCFF921BXP.bed.gz.dvc | 100.0 B | dc0dc5c1e609b4538d5896afdbc81629 |
| ENCFF921BXP.tabix.bed.gz | 142.41 KB | ff97a129de203599e2e09177b7521690 |
| ENCFF921BXP.tabix.bed.gz.dvc | 106.0 B | a8cdf3a045de02f5c9fbb7e23ae118ac |
| ENCFF921BXP.tabix.bed.gz.tbi | 85.08 KB | b26ce534aba100a2e9981c49851584b0 |
| ENCFF921BXP.tabix.bed.gz.tbi.dvc | 109.0 B | bc962074fc35d6cf1f4e29e79752b9c2 |
| genomic_resource.yaml | 2.95 KB | 691d8302820c56dfae5c8c632b478e17 |
| genomic_resource_original.yaml | 2.79 KB | 2f44c6b54d2364b98224b8a4966860b9 |
| statistics/ |