| Id: | TF_ChIP-seq/ENCSR138RCE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR138RCE [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF132" and target="ZNF132"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF132 output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF526AOS|/files/ENCFF526AOS/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN178QAF|/analyses/ENCAN178QAF/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF537EEN|/files/ENCFF537EEN/}, {ENCFF526AOS|/files/ENCFF526AOS/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.02 and a self consistency ratio of 1.59. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF213GOA|/files/ENCFF213GOA/}, {ENCFF723RCX|/files/ENCFF723RCX/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.02 and a self consistency ratio of 1.59. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR138RCE | float |
TF_ChIP-seq_ENCSR138RCE |
TF_ChIP-seq ENCSR138RCE [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF132" and target="ZNF132"]
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[16.1, 613] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF526AOS.bed.gz | 9.42 KB | 8cb8d4f768a9e6f40f093622b48f3688 |
| ENCFF526AOS.bed.gz.dvc | 98.0 B | 37cd01ef6912c83ad0dee14e98e34d62 |
| ENCFF526AOS.tabix.bed.gz | 5.82 KB | 464e1ee5ad2beaeb65b492faf5ff77cb |
| ENCFF526AOS.tabix.bed.gz.dvc | 104.0 B | 1d02da0bfad41bb7223943b9b5e77ce3 |
| ENCFF526AOS.tabix.bed.gz.tbi | 9.23 KB | bca8ed8f8710d445c5ed428ea2a07570 |
| ENCFF526AOS.tabix.bed.gz.tbi.dvc | 108.0 B | 48838b22fd1837198e6df674e6671474 |
| genomic_resource.yaml | 3.1 KB | e7943a791132fa5eee2e6915949f93f5 |
| genomic_resource_original.yaml | 2.92 KB | 89d390328e4ac10ff2c55d588169cd80 |
| statistics/ |