| Id: | TF_ChIP-seq/ENCSR136EQX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR136EQX [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens PBX3" and target="PBX3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens PBX3 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN163WOH|/analyses/ENCAN163WOH/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF672RKS|/files/ENCFF672RKS/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline have a rescue ratio of 1.13 and a self consistency ratio of 2.09. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR136EQX | float |
TF_ChIP-seq_ENCSR136EQX |
TF_ChIP-seq ENCSR136EQX [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens PBX3" and target="PBX3"]
|
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[7.92, 428] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF672RKS.bed.gz | 80.26 KB | abe22927c9ec393c6ff57c6004038d3d |
| ENCFF672RKS.bed.gz.dvc | 99.0 B | 0b0a33701520366cc4122a93ad2dfcf4 |
| ENCFF672RKS.tabix.bed.gz | 56.62 KB | 3d45449fbccc570b6fc0166547f084c5 |
| ENCFF672RKS.tabix.bed.gz.dvc | 105.0 B | fadb7d6200f4221ccb5ead61a5ea7f06 |
| ENCFF672RKS.tabix.bed.gz.tbi | 37.62 KB | cabb8861179d52da181d5424dfcdf1d9 |
| ENCFF672RKS.tabix.bed.gz.tbi.dvc | 109.0 B | b4866c294e9415bec61c2934de1c0be6 |
| genomic_resource.yaml | 2.21 KB | 2c585af654a333467fcfb241c5a4fc60 |
| genomic_resource_original.yaml | 2.05 KB | 26dd871bfb8c4afe466c22bcebc57866 |
| statistics/ |