TF_ChIP-seq_ENCSR107DKT
TF_ChIP-seq ENCSR107DKT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SP140L" and target="SP140L"]
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| Id: | TF_ChIP-seq/ENCSR107DKT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR107DKT [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SP140L" and target="SP140L"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens SP140L output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN936QAU|/analyses/ENCAN936QAU/} has in progress subobject document {d7abd6f9-4720-40b6-b0ec-bf8318c09772|/documents/d7abd6f9-4720-40b6-b0ec-bf8318c09772/} audit_internal_action: Released analysis {ENCAN936QAU|/analyses/ENCAN936QAU/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF467WXB|/files/ENCFF467WXB/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.47 and a self consistency ratio of 4.77. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF203CWF|/files/ENCFF203CWF/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.47 and a self consistency ratio of 4.77. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR107DKT | float |
TF_ChIP-seq_ENCSR107DKT |
TF_ChIP-seq ENCSR107DKT [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SP140L" and target="SP140L"]
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[7.16, 463] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF467WXB.bed.gz | 118.03 KB | 71cd8702b25a11307cb7fa092a3e580e |
| ENCFF467WXB.bed.gz.dvc | 100.0 B | e4fd70a666e36cffd1d8ab575e47e40a |
| ENCFF467WXB.tabix.bed.gz | 92.42 KB | c9f08cb298b23eb23103f84768a17e8a |
| ENCFF467WXB.tabix.bed.gz.dvc | 105.0 B | 271d7e1bd8856d3f4b57a0de42a82dcf |
| ENCFF467WXB.tabix.bed.gz.tbi | 52.9 KB | 1ada449bc3ae1bed70c977b8a8037119 |
| ENCFF467WXB.tabix.bed.gz.tbi.dvc | 109.0 B | 3abfcf3419287a3141270b72db3b56c9 |
| genomic_resource.yaml | 2.96 KB | fee97e48a52b80fdbc60679fe489fa1d |
| genomic_resource_original.yaml | 2.79 KB | b43bf86d9c5608c790f33fabe5ee50d7 |
| statistics/ |