TF_ChIP-seq_ENCSR087TYG
TF_ChIP-seq ENCSR087TYG [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens NR2F6" and target="NR2F6"]
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| Id: | TF_ChIP-seq/ENCSR087TYG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR087TYG [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens NR2F6" and target="NR2F6"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens NR2F6 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN760QSN|/analyses/ENCAN760QSN/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN760QSN|/analyses/ENCAN760QSN/} has in progress subobject document {7f464d3d-ea8f-4090-bddf-bdf5e756cf31|/documents/7f464d3d-ea8f-4090-bddf-bdf5e756cf31/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF529SRS|/files/ENCFF529SRS/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.46 and a self consistency ratio of 2.71. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF239RSE|/files/ENCFF239RSE/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.46 and a self consistency ratio of 2.71. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR087TYG | float |
TF_ChIP-seq_ENCSR087TYG |
TF_ChIP-seq ENCSR087TYG [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens NR2F6" and target="NR2F6"]
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[6.63, 321] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF529SRS.bed.gz | 73.28 KB | 499c71fc7a59eed3c6d1ae217f2ccfc1 |
| ENCFF529SRS.bed.gz.dvc | 99.0 B | 3d6d81ea8d1bee5d53b9848c64a9b563 |
| ENCFF529SRS.tabix.bed.gz | 48.42 KB | 73fd1180dbe0135752d3df7034c0cdb4 |
| ENCFF529SRS.tabix.bed.gz.dvc | 105.0 B | 1379151406af51efca765e8bd10da6a2 |
| ENCFF529SRS.tabix.bed.gz.tbi | 39.73 KB | 10fa2439797867e5313126861bc9face |
| ENCFF529SRS.tabix.bed.gz.tbi.dvc | 109.0 B | b522d54ae945f531964069b12cc3e22d |
| genomic_resource.yaml | 2.95 KB | 2fb1577e6e45839366cf3944652443d1 |
| genomic_resource_original.yaml | 2.79 KB | cbc8aa0097383bfd6a18d3443007f2ad |
| statistics/ |