| Id: | TF_ChIP-seq/ENCSR047BUZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR047BUZ [biosamplesummary="Homo sapiens HepG2" and target="ATF2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN108GYV|/analyses/ENCAN108GYV/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF994LMJ|/files/ENCFF994LMJ/} processed by ChIP-seq ENCODE4 v1.7.1 GRCh38 pipeline have a rescue ratio of 1.38 and a self consistency ratio of 2.17. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR047BUZ | float |
TF_ChIP-seq_ENCSR047BUZ |
TF_ChIP-seq ENCSR047BUZ [biosample_summary="Homo sapiens HepG2" and target="ATF2"]
|
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[11.3, 7.86e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF994LMJ.bed.gz | 976.28 KB | 32f2b67c84151ec7b72894b8d7a54f85 |
| ENCFF994LMJ.bed.gz.dvc | 100.0 B | 982393cdc8e5784c69f610f82f628d52 |
| ENCFF994LMJ.tabix.bed.gz | 708.71 KB | dc039701e9012cc1c6104b7078ea346a |
| ENCFF994LMJ.tabix.bed.gz.dvc | 106.0 B | 0f286c23f02dcc52acd975f805412668 |
| ENCFF994LMJ.tabix.bed.gz.tbi | 380.64 KB | 4c5a8ae095909802831b7f39b992cc88 |
| ENCFF994LMJ.tabix.bed.gz.tbi.dvc | 110.0 B | d536937fa583bb7b09b734fc4ae1fa2c |
| genomic_resource.yaml | 2.23 KB | a09649d6de38afca1a30ebb178e9155e |
| genomic_resource_original.yaml | 2.13 KB | 25b9afcc7130bee5bf9954afb3e4c6d2 |
| statistics/ |