TF_ChIP-seq_ENCSR029IBC
TF_ChIP-seq ENCSR029IBC [biosample_summary="Homo sapiens HepG2" and target="ARNT"]
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| Id: | TF_ChIP-seq/ENCSR029IBC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR029IBC [biosamplesummary="Homo sapiens HepG2" and target="ARNT"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN924FWD|/analyses/ENCAN924FWD/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF357FTD|/files/ENCFF357FTD/}, {ENCFF808WQI|/files/ENCFF808WQI/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.27 and a self consistency ratio of 1.17. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF482BMY|/files/ENCFF482BMY/}, {ENCFF272CDM|/files/ENCFF272CDM/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.27 and a self consistency ratio of 1.17. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR029IBC | float |
TF_ChIP-seq_ENCSR029IBC |
TF_ChIP-seq ENCSR029IBC [biosample_summary="Homo sapiens HepG2" and target="ARNT"]
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[14.4, 647] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF808WQI.bed.gz | 23.96 KB | 0abe74aad8be20ae1d2cdd97ab5fb152 |
| ENCFF808WQI.bed.gz.dvc | 99.0 B | a145a79dfa3473f0fb4fcf4c10ac795d |
| ENCFF808WQI.tabix.bed.gz | 15.17 KB | 60a621c6815847af20d346b33a855bdf |
| ENCFF808WQI.tabix.bed.gz.dvc | 105.0 B | 61e9b94d5a7ad10005ca930ed1c90acf |
| ENCFF808WQI.tabix.bed.gz.tbi | 16.55 KB | 06acb7dd6cbacad6436c1d341ada558d |
| ENCFF808WQI.tabix.bed.gz.tbi.dvc | 109.0 B | a4f1600d8438a67b52a55bdb4df1c080 |
| genomic_resource.yaml | 2.47 KB | a73f66c70d35a41c557ceb13af846f68 |
| genomic_resource_original.yaml | 2.38 KB | e98c26ed36ef029672add6e2ebf821ea |
| statistics/ |