TF_ChIP-seq_ENCSR013RNH
TF_ChIP-seq ENCSR013RNH [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens E2F2" and target="E2F2"]
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| Id: | TF_ChIP-seq/ENCSR013RNH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR013RNH [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens E2F2" and target="E2F2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens E2F2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN816PPM|/analyses/ENCAN816PPM/} has in progress subobject document {7009d3c0-dcc5-4bad-8aa0-271c2ed6bc1f|/documents/7009d3c0-dcc5-4bad-8aa0-271c2ed6bc1f/} audit_internal_action: Released analysis {ENCAN816PPM|/analyses/ENCAN816PPM/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF372PXU|/files/ENCFF372PXU/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.97 and a self consistency ratio of 5.01. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF629CDJ|/files/ENCFF629CDJ/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.97 and a self consistency ratio of 5.01. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR013RNH | float |
TF_ChIP-seq_ENCSR013RNH |
TF_ChIP-seq ENCSR013RNH [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens E2F2" and target="E2F2"]
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[8.44, 265] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF372PXU.bed.gz | 124.61 KB | 4df029d7991d85e880c252cdebaa9cd0 |
| ENCFF372PXU.bed.gz.dvc | 100.0 B | 30754d405ba5bb18cb28e64dfc0f271c |
| ENCFF372PXU.tabix.bed.gz | 88.05 KB | a4142a3e5f813ed7da0127e50cc115da |
| ENCFF372PXU.tabix.bed.gz.dvc | 105.0 B | 8bc8dd440bceb8ad05736df5d3449a64 |
| ENCFF372PXU.tabix.bed.gz.tbi | 52.61 KB | d4a78e7b6355ee5cabbb0607dc7d7da1 |
| ENCFF372PXU.tabix.bed.gz.tbi.dvc | 109.0 B | 521757a4b959d34c64fb40dde53e8ab9 |
| genomic_resource.yaml | 2.94 KB | ae03f6847d97eff0ff5c56ea6887fb3a |
| genomic_resource_original.yaml | 2.78 KB | e7a5a85615558e900f0dbd902c435520 |
| statistics/ |