TF_ChIP-seq_ENCSR000EHL
TF_ChIP-seq ENCSR000EHL [biosample_summary="Homo sapiens K562" and target="POLR2A"]
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| Id: | TF_ChIP-seq/ENCSR000EHL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000EHL [biosamplesummary="Homo sapiens K562" and target="POLR2A"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN003RFG|/analyses/ENCAN003RFG/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_not_compliant: Processed alignments file {ENCFF318TVO|/files/ENCFF318TVO/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7566021 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting POLR2A-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_not_compliant: Processed alignments file {ENCFF371LNT|/files/ENCFF371LNT/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7169187 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting POLR2A-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000EHL | float |
TF_ChIP-seq_ENCSR000EHL |
TF_ChIP-seq ENCSR000EHL [biosample_summary="Homo sapiens K562" and target="POLR2A"]
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[3.92, 164] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF394LOQ.bed.gz | 228.4 KB | f68323c451656aa98cda4989cef2e027 |
| ENCFF394LOQ.bed.gz.dvc | 100.0 B | 32b49227a23b092371ba3549255ed6c1 |
| ENCFF394LOQ.tabix.bed.gz | 191.55 KB | c725793c45f4b3ccbe807a181dff13d7 |
| ENCFF394LOQ.tabix.bed.gz.dvc | 106.0 B | 123108638b12cb4e4811e9d5dd24db2b |
| ENCFF394LOQ.tabix.bed.gz.tbi | 76.93 KB | 645d92ad2c79f1e266a89d62aeea23ad |
| ENCFF394LOQ.tabix.bed.gz.tbi.dvc | 109.0 B | bcda45ac82cb840a67a66950b7428115 |
| genomic_resource.yaml | 2.35 KB | 86217b4bc857ef4a38d918ab38c1e21e |
| genomic_resource_original.yaml | 2.25 KB | 4a432da5b12aed1ccb58ad7d280c1dc5 |
| statistics/ |