TF_ChIP-seq_ENCSR000EGW
TF_ChIP-seq ENCSR000EGW [biosample_summary="Homo sapiens K562" and target="SMC3"]
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| Id: | TF_ChIP-seq/ENCSR000EGW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000EGW [biosamplesummary="Homo sapiens K562" and target="SMC3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN736MCK|/analyses/ENCAN736MCK/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_not_compliant: Processed alignments file {ENCFF359UWD|/files/ENCFF359UWD/} processed by ChIP-seq ENCODE3 hg19 pipeline has 9172633 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting SMC3-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF845WVY|/files/ENCFF845WVY/} processed by ChIP-seq ENCODE3 hg19 pipeline has 11189144 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting SMC3-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000EGW | float |
TF_ChIP-seq_ENCSR000EGW |
TF_ChIP-seq ENCSR000EGW [biosample_summary="Homo sapiens K562" and target="SMC3"]
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[3.43, 407] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF041YQC.bed.gz | 444.13 KB | 2933d00ffe16c0f6bdc6e17cf2aa672e |
| ENCFF041YQC.bed.gz.dvc | 100.0 B | 8777be571dca1e5b4eed91a141d80d7e |
| ENCFF041YQC.tabix.bed.gz | 315.17 KB | 92a2ce668a8eda54730f057f60d7d179 |
| ENCFF041YQC.tabix.bed.gz.dvc | 106.0 B | ce64094d67737ffaf0e10cd3a10b5c89 |
| ENCFF041YQC.tabix.bed.gz.tbi | 186.27 KB | f4075f5f7ffa912e55d0df783d171bbf |
| ENCFF041YQC.tabix.bed.gz.tbi.dvc | 110.0 B | 6093205c3f4a4d6ad82ba7fb61c0d917 |
| genomic_resource.yaml | 2.33 KB | 47bfbdb05f22a6088dba4a335608808a |
| genomic_resource_original.yaml | 2.24 KB | e4b7673a13a0a9ac333b4c231dcf99ce |
| statistics/ |