TF_ChIP-seq_ENCSR000EEL
TF_ChIP-seq ENCSR000EEL [biosample_summary="Homo sapiens HepG2" and target="TBP"]
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| Id: | TF_ChIP-seq/ENCSR000EEL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000EEL [biosamplesummary="Homo sapiens HepG2" and target="TBP"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN059VHH|/analyses/ENCAN059VHH/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF534GKQ|/files/ENCFF534GKQ/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Processed alignments file {ENCFF031LWP|/files/ENCFF031LWP/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 14797536 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting TBP-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF956OLR|/files/ENCFF956OLR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 15617190 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting TBP-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000EEL | float |
TF_ChIP-seq_ENCSR000EEL |
TF_ChIP-seq ENCSR000EEL [biosample_summary="Homo sapiens HepG2" and target="TBP"]
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[4.77, 626] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF534GKQ.bed.gz | 321.52 KB | fddc6dab6d2c682f099ed0317146a5e0 |
| ENCFF534GKQ.bed.gz.dvc | 100.0 B | c44b38acb7e44c34fbaa22237dbc6da3 |
| ENCFF534GKQ.tabix.bed.gz | 232.48 KB | 29c048953001883bd8a72fb7e5bfad3b |
| ENCFF534GKQ.tabix.bed.gz.dvc | 106.0 B | 77996844b4fcb427ec74961b48332720 |
| ENCFF534GKQ.tabix.bed.gz.tbi | 106.98 KB | b2acfcf14263c3e4a34416394171c330 |
| ENCFF534GKQ.tabix.bed.gz.tbi.dvc | 110.0 B | edf1e5c20eadffc63514be2998356348 |
| genomic_resource.yaml | 2.51 KB | 84f9fec5f5b742550c4a8d21c11ad8e3 |
| genomic_resource_original.yaml | 2.42 KB | 3a837a8814dc386ddc8d622ce0b5eb2e |
| statistics/ |