TF_ChIP-seq_ENCSR000EDD
TF_ChIP-seq ENCSR000EDD [biosample_summary="Homo sapiens HeLa-S3" and target="TBP"]
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| Id: | TF_ChIP-seq/ENCSR000EDD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000EDD [biosamplesummary="Homo sapiens HeLa-S3" and target="TBP"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN013EEU|/analyses/ENCAN013EEU/} has in progress subobject document {262ed9da-5134-432d-bbdc-b88519e0d2dc|/documents/262ed9da-5134-432d-bbdc-b88519e0d2dc/} audit_internal_action: Released analysis {ENCAN013EEU|/analyses/ENCAN013EEU/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Processed alignments file {ENCFF939BJG|/files/ENCFF939BJG/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 12716333 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting TBP-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF167QWB|/files/ENCFF167QWB/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 11028348 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting TBP-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000EDD | float |
TF_ChIP-seq_ENCSR000EDD |
TF_ChIP-seq ENCSR000EDD [biosample_summary="Homo sapiens HeLa-S3" and target="TBP"]
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[3.71, 655] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF363NQY.bed.gz | 420.79 KB | 9b788404aecc3c8ffa7098bcf59b1917 |
| ENCFF363NQY.bed.gz.dvc | 100.0 B | b55e92f4d2341e15d6fb8f9edd0165fa |
| ENCFF363NQY.tabix.bed.gz | 299.95 KB | 9722c1784acc39ff5b7280fb119edab5 |
| ENCFF363NQY.tabix.bed.gz.dvc | 106.0 B | b4483037d32843db6f5d110dab6324fa |
| ENCFF363NQY.tabix.bed.gz.tbi | 131.87 KB | e928a73fb102e58b10b6f59c7947ef64 |
| ENCFF363NQY.tabix.bed.gz.tbi.dvc | 110.0 B | 72d6db6ff504bcdc6a5802a52e5d0268 |
| genomic_resource.yaml | 2.56 KB | 178f1b7b1cb447cb31938d28db2910c2 |
| genomic_resource_original.yaml | 2.46 KB | 00b8ede6f056de89238d942a180fc1e0 |
| statistics/ |