| Id: | TF_ChIP-seq/ENCSR000DZP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000DZP [biosamplesummary="Homo sapiens GM12878" and target="SMC3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN857WBH|/analyses/ENCAN857WBH/} has in progress subobject document {08628570-0f8d-4cd8-b8c4-ab3d8fc4a9af|/documents/08628570-0f8d-4cd8-b8c4-ab3d8fc4a9af/} audit_internal_action: Released analysis {ENCAN857WBH|/analyses/ENCAN857WBH/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF837YJA|/files/ENCFF837YJA/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.62 and a self consistency ratio of 3.00. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000DZP | float |
TF_ChIP-seq_ENCSR000DZP |
TF_ChIP-seq ENCSR000DZP [biosample_summary="Homo sapiens GM12878" and target="SMC3"]
|
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[6.43, 353] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF837YJA.bed.gz | 576.31 KB | 2a28a7ccbb3b9461072b165af550d2bf |
| ENCFF837YJA.bed.gz.dvc | 100.0 B | 58bb49a522db39bbeec9474ffc0449ca |
| ENCFF837YJA.tabix.bed.gz | 406.82 KB | c0f8ae280c70d8a25eee2169fc2938ba |
| ENCFF837YJA.tabix.bed.gz.dvc | 106.0 B | 9ac582c25d8187f4f4562fcb420051cd |
| ENCFF837YJA.tabix.bed.gz.tbi | 233.49 KB | d6b2e28f84a5cc275e7b2bd9bcf6577d |
| ENCFF837YJA.tabix.bed.gz.tbi.dvc | 110.0 B | 3f5f2eb7092f26d0a84a8a6d06413d39 |
| genomic_resource.yaml | 2.1 KB | bf68004ac5425e5cd9af8a541da8ad35 |
| genomic_resource_original.yaml | 2.0 KB | cca79671a6159775d727ad403a0eb674 |
| statistics/ |