type: position_score
table:
  filename: ENCFF719UZS.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR000DQY
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR000DQY [TISSUE: Homo sapiens GM12801, TARGET: CTCF]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1\n\n**summary**:\
    \ \n\n**output\\_type**: IDR thresholded peaks\n\n**audit\\_error**: Processed\
    \ alignments file {ENCFF063PXW|/files/ENCFF063PXW/} processed by ChIP-seq ENCODE4\
    \ v1.5.1 GRCh38 pipeline has 4547758 usable fragments. The minimum ENCODE standard\
    \ for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated\
    \ as a transcription factor is 10 million usable fragments. The recommended value\
    \ is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data\
    \ standards|/data-standards/chip-seq/} )\n\n**audit\\_internal\\_action**: Released\
    \ analysis {ENCAN503ZTW|/analyses/ENCAN503ZTW/} has in progress subobject quality\
    \ standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}\n\n**audit\\\
    _internal\\_action**: Released analysis {ENCAN503ZTW|/analyses/ENCAN503ZTW/} has\
    \ in progress subobject document {6d54302e-605a-447a-9b88-9bbd5200d511|/documents/6d54302e-605a-447a-9b88-9bbd5200d511/}"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000DQY
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens GM12801
    replication_type: unreplicated
    biosample_ontology: /biosample-types/cell_line_EFO_0005353/
    perturbed: false
    doi: 10.17989/ENCSR000DQY
    date_created: '2013-12-12T06:56:37.345821+00:00'
    date_released: '2011-03-17'
    submitter_comment: ''
    target: CTCF
