type: position_score
table:
  filename: ENCFF284FTY.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR000DOK
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR000DOK [biosample_summary="Homo sapiens K562" and target="BDP1"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR000DOK [biosample_summary="Homo sapiens K562" and target="BDP1"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2,\
    \ Rep 3\n\n**summary**: \n\n**output\\_type**: IDR thresholded peaks\n\n**audit\\\
    _internal\\_action**: Released analysis {ENCAN438QXX|/analyses/ENCAN438QXX/} has\
    \ in progress subobject document {797f5e55-5642-41b7-80ad-a5d1d788897c|/documents/797f5e55-5642-41b7-80ad-a5d1d788897c/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN438QXX|/analyses/ENCAN438QXX/}\
    \ has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF039NAG|/files/ENCFF039NAG/}\
    \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 6091980 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ BDP1-human and investigated as a transcription factor is 10 million usable fragments.\
    \ The recommended value is > 20 million, but > 10 million is acceptable. (See\
    \ {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} )\n\n**audit\\_not\\\
    _compliant**: Processed alignments file {ENCFF264LHV|/files/ENCFF264LHV/} processed\
    \ by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 6082982 usable fragments. The\
    \ minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ BDP1-human and investigated as a transcription factor is 10 million usable fragments.\
    \ The recommended value is > 20 million, but > 10 million is acceptable. (See\
    \ {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} )\n\n**audit\\_not\\\
    _compliant**: Processed alignments file {ENCFF938MMD|/files/ENCFF938MMD/} processed\
    \ by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 6076335 usable fragments. The\
    \ minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ BDP1-human and investigated as a transcription factor is 10 million usable fragments.\
    \ The recommended value is > 20 million, but > 10 million is acceptable. (See\
    \ {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} )"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000DOK
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens K562
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002067/
    perturbed: false
    doi: 10.17989/ENCSR000DOK
    date_created: '2014-02-12T23:29:29.295917+00:00'
    date_released: '2011-10-29'
    submitter_comment: ''
    target: BDP1
